checklist says the is fuel flow at the IP inlet. So if you have fuel pressure there, then try unplugging the return hose on the IP.
You should not have any air come out of the fuel filter after cranking unless the LP is not supplying enough pressure while cranking.
The IP rebuilders make their own plates on the IPs so they just screwed up the number on it. Pull the PCM out from behind the glove box and open up the access hatch on the back of it to see what the 4 letters are on the PROM chip inside. Then I can look up what IP is supposed to be in there, or if you need to change the PROM chip.
If you have an SES light and get the GP light, (most 94s had a GP light, 95s had WTS light) then the PCM has power. And if they could connect a scanner then it is powered fine.
I would do the steps I posted on the first page, and if nothing works then perhaps verify through the oil fill tube hole that the IP dowel thing was put into the correct hole in the timing gear. It goes in the slightly oblong one.
I also assume when you replaced the CPS that it had a hard plastic body and mount. If it was the tpye with a metal mounting tab and it came off you can physically mount the tab 90-270 degrees off and CPS wont work right.
If you still have that OS filter on the engine harness to the IP's OS, then remove it.
All that info is in the file I posted as well.