Trust me, that second-guessing yourself doesn't have to be a bad thing. At the end of the day, what often kills a home rebuilt engine is some detail that got overlooked.
Over time, each engine I build gets more & more hand written documentation/notes. And I'll often let it set completed (as far as I know) on the stand for a week, to let those 2nd guess type thoughts run thru my head.
I've started doing this, because the same 2nd guess thoughts are prolly gonna roll thru your head anyway. And if it happens you remember a detail that matters, you can fix it easier on the stand, before any potential dmg happens.
Guys that build engines everyday don't need to do this, because time/experience has developed the checklist we need written down, is pretty much imprinted on their brain. Us hobbyists don't have that advantage.
I think the risk/reward potential makes that engine a pretty good bet (which is somewhat, what they all are). Even the ones w/ a warranty sometimes fail.
If you pull it down & check things out, & reassemble it carefully/correctly, it should be good. Don't presume the main/rod bearings will need replaced. They may be fine. Simply gotta check, to know.
Whenever you get it there, let me know. Omaha's not too big a trip & I'd be happy to help a day or two. I've got the manuals & OD micrometers, & a dial indicator. Would be good if you could borrow inside mic's - maybe somebody at your work has them.
I like to torque the bearings/caps in, the measure bearing ID, crank OD, & calculate oil clearnance. As I don't use micrometers daily, it takes a while to get familiar again so you consistently get the same measurement = precision. As a second check, I always verify what the clearance measurements calc'd out to be, w/ plastigage.