Yeah, FTE members can get a bit prickley at times and I regularly take a break from that site as well. Especially when people ask a super basic question with lots of information already available (like: 'Hey, what is a better / the best injector?') or basic specifications (like: 'Hey, how much can I tow?') and then get upset when people like myself refuse to answer the question and politely point out that the answers are easily available by either searching or opening the owners manual (which is still available for download from Ford). But, oh well, they are too smart for the rest of us, except for the part that they are not smart enough to look on their own.

There are a core group of individuals whom provide great value to the community by way of continuing to offer repair advice as well as testing of new aftermarket products.
But I digress . . .
For the transmission, about two years ago, Wise seemed to rise toward the top of transmission outfits for this truck. With COVID, cannot tell whether this holds true, so searching on FTE will help with decisions. Wish I had more information to relay about the transmission, but I have a stick and do not pay much attention to conversations about the slushbox.
What that truck really needs is a 6 speed transmission as the 4 speed makes the engine work harder. If you do not mind a manual transmission, converting over to the ZF-6 will unleash a lot of the engine's power. Have not seen where anybody converted to a 6 speed automatic.
If the turbo seems like it needs overhaul, consider looking into current threads in terms of alternatives as there are some very interesting developments.
One thing to watch is modifying the exhaust pipe diameter without modifying the turbo. If the exhaust pipes are OE size, then things are fine as-is. If there is interest in going with 4 inch pipes, the turbo *MUST* get modification otherwise it is at risk of a short life from surge (a condition where the compressor repeatedly stalls while simultaneously trying to make power). Curing / preventing surge is easily done with an aftermarket compressor wheel, but with the new turbo options available it opens the question of whether to modify the OE turbo or replace it with a better unit.