Fyi, 93 and 95 are not the same 4l80e trans. There are MANY differences in them, but what is getting you is you have no output speed sensor in the trans. 91-93 4x4's used both the input AND output speed sensors in the transmission. 94+ 4x4's did not use the output speed sensor in the trans, nor did they even have a reluctor wheel in the output of the trans. You have done an incompatible swap.
Your options are you can swap to a 94 harness and all the wiring changes for 4 wheel drive that entails, or pull the 95 trans and convert it back to a 93 compatible style. You need to swap the valve bodies, I'm guessing you already swapped the manual shift shaft to connect the linkage, I'm guessing you already switched to the late model harness, and pull the trans COMPLETELY apart to install a sonnax reluctor for the output speed sensor. There is no easy way out of this one unfortunately.
As to the engine, did you swap tbi units? If not be prepared for a BURNT engine from running it SCARY lean. Up to 93 the 454 ran at 8-13 psi of fuel pressure, 94-95 ran at 30-38 psi of fuel pressure. The early fuel pumps tend to max out at 13-15 psi of pressure, so it will run and open the injectors, but it will be SCARY lean and BEGGING to melt a valve or piston.