Tranny lines, Rob. Plug the lines with a little chunk of plastic or wood (like a slightly whittled-down golf tee), and plug the fittings in the rad with something to keep water etc from getting in there. I picked up a couple little plastic plugs at the hardware store when I did mine.
I never bothered getting mine boiled out, and they can't rod these aluminum rads properly. I figured if it was pooched, I could order a new one cheap enough, so I wasn't tossing more $$ after this one.
Turned out I didn't need to.
CHeck and clean your tstat fan clutch while you got it apart, and this is a good time to change thermostat, too. Take your time on the rad - soak, clean, soak, over and over. I put mine face-down on 2 sawhorses in the driveway, where I could wash the crap away easily, into the street. Get some foamy coil cleaner or 'scrubbing bubbles' cleaner to help with the soaking.
Oh, and beer. Spray the rad with cleaner, let soak while you have a beer. One beer is about perfect for soaking time. Tell the Missus it's just a timing device, recommended by your Canadian friends.

Takes about 3-4 soakings to clean a rad properly.
One of the old guys posted that he used a leaf-blower to blow it out after soaking and washing, and got a ton of little sand particles out... might be worth a try if you have one.
Don't use a pressure washer - a garden hose sprayer works just fine. The Aluminum fins bend easy. Same goes for compressed air... keep your distance.
Have fun!